Fitting dose-response models in R

Hierarchical dose-response models in R

An R package to fit Bayesian model averaging of (possibly longitudinal) dose-response models.

U.S EPA Benchmark Dose Modeling Software (BMDS)

Refactored version of the drc package, a framework for fitting and analyzing dose–response models. This repository restructures the codebase to improve maintainability, transparency, and future development.

Biological effects and equivalent doses in radiotherapy: A software solution

Analysis of Ecotoxicology

tidy modelling of dose-response relationships with the drc package

Example R scripts to create a dose-response curve and extract ECx-values.

A Python module for analysis and visualization of dose-response data

EXPORT: Explainable VAE for ordinally perturbed transcriptomics data

This repository contains the raw data and R scripts for "Quantification of an Adverse Outcome Pathway network by Bayesian regression and Bayesian network modeling" by Moe et al. 2020, Integr Environ Assess Manag, doi:10.1002/ieam.4348.

This project aims to better understand how ketamine affects consciousness. It investigates markers of ego dissolution and dose-response relationships. Several subsequent studies will probably be published based on this project.

Optimal dose design & MED identification using PopED, Emax modelling, and Monte Carlo simulation in R program

A Python library for building, summarizing, and fitting dose-response models

MATLAB-based toolkit for radiation dose-response analysis, including data validation, model selection, curve fitting, and dose inversion. Supports multiple survival fraction models (L, Q, LQ, LQC, LQL).

The BMDS User Guide

Postdoctoral Researcher in Pharmacometrics

Trimmed Spearman-Karber Method

The Co-culture Efficacy Score (CES) is a quantitative framework for measuring drug activity in complex multicellular systems. It integrates cumulative activity and maximal efficacy into a single interpretable score, separating general toxicity from true effector-mediated cytotoxicity.