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  1. gcp-scripts-rktmm gcp-scripts-rktmm Public

    Forked from nibscbioinformatics/gcp-scripts

    Scripts for HPC-GCP data transfer

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  2. hpc_guide hpc_guide Public

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    Sphinx documentation to NIBSC HPC

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  3. metaphlan2strainphlan metaphlan2strainphlan Public

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    Pipeline carries out taxonomy analysis on metagenomic sequencing by pre-processing reads and using MetaPhlAn and StrainPhlAn.

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  4. data_submission_scripts data_submission_scripts Public

    Forked from ds-mhra/data_submission_scripts

    Scripts to aid with completing metadata forms and uploading data to online repositories, namely NCBI's SRA.

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  5. nf-core-viralreconlofreq nf-core-viralreconlofreq Public

    Forked from ds-mhra/nf-core-viralreconlofreq

    Pipeline cloned from viralrecon with amendments to include the lofreq variant caller which can merge results with other available callers after alignment genera tes .bam files.

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  6. BAD_project BAD_project Public

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    Bile acid diarrhoea PhD project

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