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    27 repositories

    • squid-tracking

      Public
      Squid tracking microscopy
      Python
      •
      GNU General Public License v3.0
      •52•6•0•0•Updated Oct 16, 2025Oct 16, 2025

    • 1d_folding_sim

      Public
      1D simulation of cilia-driven active folding and unfolding
      MATLAB
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Feb 27, 2025Feb 27, 2025

    • inkwell

      Public
      an electric-free blood-smearing device
      G-code
      •
      CERN Open Hardware Licence Version 2 - Strongly Reciprocal
      •0•6•1•0•Updated Feb 18, 2025Feb 18, 2025

    • tots-planktoscope-analysis

      Public
      Data QC/analysis scripts for PlanktoScope datasets in the ToTS project
      planktoscope
      planktoscope
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Nov 12, 2024Nov 12, 2024

    • tots-iridium-sbd-parser

      Public archive
      Parsing of Iridium SBD files for ToTS sediment traps
      Python
      •
      Apache License 2.0
      •10•0•0•0•Updated Sep 10, 2024Sep 10, 2024

    • anmo2l-docs

      Public archive
      Documentation for the AnmO2l oulse-dose oxygen conservation system
      JavaScript
      •0•0•0•0•Updated Mar 15, 2024Mar 15, 2024

    • tots-planktoscope-autoprocessing

      Public archive
      Shell scripts to automatically process PlanktoScope datasets in the ToTS project
      planktoscope
      planktoscope
      Shell
      •
      Apache License 2.0
      •0•0•0•0•Updated Jun 29, 2023Jun 29, 2023

    • codex-analysis-pipeline

      Public
      Scripts for analyzing the outputs of CODEX microscopy platform.
      Python
      •
      Apache License 2.0
      •2•0•0•0•Updated Jun 27, 2023Jun 27, 2023

    • Trichoplax_Thermotaxis

      Public
      Jupyter Notebook
      •0•0•0•0•Updated May 8, 2023May 8, 2023

    • template-weakly-reciprocal

      Public template
      Github repo template for sharing your work under a weakly-reciprocal license
      Creative Commons Attribution Share Alike 4.0 International
      •2•0•0•0•Updated May 2, 2023May 2, 2023

    • template-strongly-reciprocal

      Public template
      Github repo template for sharing your work under a strongly-reciprocal license
      Creative Commons Attribution Share Alike 4.0 International
      •2•0•0•0•Updated May 2, 2023May 2, 2023

    • template-permissive

      Public template
      Github repo template for sharing your work under a permissive license
      Apache License 2.0
      •2•1•0•0•Updated May 2, 2023May 2, 2023

    • octopi-research

      Public
      0•0•0•0•Updated Mar 12, 2023Mar 12, 2023

    • pslive

      Public
      Public livestreaming and real-time interactivity for Planktoscopes
      Go
      •
      Apache License 2.0
      •1•0•0•0•Updated Aug 8, 2022Aug 8, 2022

    • fluitans

      Public
      Manage ZeroTier networks together with public DNS records
      Go
      •
      Apache License 2.0
      •1•0•0•0•Updated Aug 8, 2022Aug 8, 2022

    • stimulated

      Public
      Reusable modest JS sprinkles & controllers for web apps
      JavaScript
      •
      Apache License 2.0
      •1•0•0•0•Updated May 26, 2022May 26, 2022

    • latreutes

      Public
      Desktop application for browsing and connecting to ZeroTier and Sargassum networks
      Svelte
      •
      Apache License 2.0
      •1•0•0•0•Updated Mar 14, 2022Mar 14, 2022

    • squid-tracking-analysis-gui

      Public
      Tracking microscopy dataset visualization for Squid research microscopes.
      Python
      •
      GNU General Public License v3.0
      •2•0•0•0•Updated Aug 2, 2021Aug 2, 2021

    • pulse-dose-device

      Public
      C
      •0•0•0•0•Updated Jul 3, 2021Jul 3, 2021

    • octopi-driver-board

      Public archive
      Driver electronics for the Octopi and Squid microscope families.
      hardwaremicroscope
      hardwaremicroscope
      C++
      •
      Other
      •5•6•8•0•Updated May 13, 2021May 13, 2021

    • snap-dx-dev-tool

      Public archive
      C++
      •0•0•0•0•Updated May 8, 2021May 8, 2021

    • evaporating-multi-droplets

      Public
      Mathematica
      •0•1•0•0•Updated Apr 21, 2021Apr 21, 2021

    • open-hardware-site

      Public archive
      Template for an open hardware project static website, using Gatsby and Reflex.
      JavaScript
      •
      Other
      •2•5•1•1•Updated Dec 4, 2020Dec 4, 2020

    • squid-analysis-scripts

      Public
      Scripts for analyzing squid tracking data.
      Jupyter Notebook
      •2•0•0•0•Updated Oct 22, 2020Oct 22, 2020

    • handyfuge

      Public archive
      Mechanical design files for a portable hand-powered centrifuge
      hardwarecentrifuge
      hardwarecentrifuge
      Other
      •1•5•0•0•Updated Jul 3, 2020Jul 3, 2020

    • punchcard-microfluidics

      Public archive
      Software for controlling the punchcard microfluidics system from a Raspberry Pi
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•1•0•0•Updated Jul 15, 2019Jul 15, 2019

    • picamera-mqtt

      Public archive
      MQTT-based control and image capture with local and remote networked Raspberry Pi cameras.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •3•7•0•0•Updated Dec 16, 2018Dec 16, 2018
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