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@GMOD

Generic Model Organism Database Project

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  1. Chado Chado Public

    the GMOD database schema

    PLpgSQL 46 23

  2. jbrowse-components jbrowse-components Public

    Source code for JBrowse 2, a modern React-based genome browser

    TypeScript 278 80

  3. jbrowse jbrowse Public

    JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.

    JavaScript 473 201

  4. Apollo Apollo Public

    Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.

    Groovy 139 88

Repositories

Showing 10 of 115 repositories
  • Apollo3 Public

    JBrowse 2 plugin for editing annotations on an Apollo server

    GMOD/Apollo3’s past year of commit activity
    TypeScript 15 Apache-2.0 9 72 5 Updated Mar 30, 2026
  • nclist-js Public

    Read JBrowse v1 nested containment list feature stores from modern JS

    GMOD/nclist-js’s past year of commit activity
    TypeScript 0 MIT 0 0 2 Updated Mar 30, 2026
  • jb2hubs Public

    Source code for the JBrowse 2 genome hubs webite and data processing scripts

    GMOD/jb2hubs’s past year of commit activity
    TypeScript 0 0 31 2 Updated Mar 30, 2026
  • jbrowse-components Public

    Source code for JBrowse 2, a modern React-based genome browser

    GMOD/jbrowse-components’s past year of commit activity
    TypeScript 278 Apache-2.0 80 179 (2 issues need help) 13 Updated Mar 30, 2026
  • hclust Public

    Hierarchical clustering in javascript

    GMOD/hclust’s past year of commit activity
    TypeScript 2 0 0 0 Updated Mar 29, 2026
  • mobx-state-tree Public

    JBrowse fork of mobx-state-tree, based on v5.4.2

    GMOD/mobx-state-tree’s past year of commit activity
    TypeScript 0 MIT 0 0 0 Updated Mar 29, 2026
  • tabix-js Public

    Read Tabix-indexed files, either with .tbi or .csi indexes, in node or the browser

    GMOD/tabix-js’s past year of commit activity
    TypeScript 14 MIT 4 2 0 Updated Mar 28, 2026
  • vcf-js Public

    Variant Call Format (VCF) parser

    GMOD/vcf-js’s past year of commit activity
    TypeScript 26 MIT 4 2 1 Updated Mar 28, 2026
  • ucsc-hub-js Public

    read and write UCSC track and assembly hub files in node or the browser

    GMOD/ucsc-hub-js’s past year of commit activity
    TypeScript 5 MIT 1 5 1 Updated Mar 28, 2026
  • twobit-js Public

    Read .2bit files with pure JS. Works in node or webpack.

    GMOD/twobit-js’s past year of commit activity
    TypeScript 4 MIT 1 0 1 Updated Mar 28, 2026
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