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@BioJulia

BioJulia

Bioinformatics and Computational Biology in Julia

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  1. GenomeGraphs.jl GenomeGraphs.jl Public

    A modern genomics framework for julia

    Julia 71 7

  2. BioSequences.jl BioSequences.jl Public

    Biological sequences for the julia language

    Julia 162 51

  3. Contributing Contributing Public

    Documentation, guidelines, and policy on contributing to all BioJulia repositories

    17 6

  4. BioCore.jl BioCore.jl Public

    Core types and interfaces for BioJulia packages

    Julia 33 11

  5. BioSymbols.jl BioSymbols.jl Public

    Nucleic and amino acid primitive types

    Julia 34 14

  6. GeneticVariation.jl GeneticVariation.jl Public

    Datastructures and algorithms for working with genetic variation

    Julia 45 18

Repositories

Showing 10 of 90 repositories
  • BioStructures.jl Public

    A Julia package to read, write and manipulate macromolecular structures

    BioJulia/BioStructures.jl’s past year of commit activity
    Julia 106 24 9 2 Updated Mar 30, 2026
  • SingleCellProjections.jl Public

    Analysis of Single Cell Expression data in Julia

    BioJulia/SingleCellProjections.jl’s past year of commit activity
    Julia 26 4 4 2 Updated Mar 30, 2026
  • BioTutorials Public

    Tutorial Notebooks of BioJulia

    BioJulia/BioTutorials’s past year of commit activity
    SCSS 38 8 9 1 Updated Mar 25, 2026
  • BioAlignments.jl Public

    Sequence alignment tools

    BioJulia/BioAlignments.jl’s past year of commit activity
    Julia 65 MIT 26 22 2 Updated Mar 18, 2026
  • Automa.jl Public

    A julia code generator for regular expressions

    BioJulia/Automa.jl’s past year of commit activity
    Julia 198 16 9 1 Updated Mar 12, 2026
  • CIGARStrings.jl Public

    Read and write Concise Idiosyncratic Gapped Alignment Reports.

    BioJulia/CIGARStrings.jl’s past year of commit activity
    Julia 1 MIT 0 0 0 Updated Feb 20, 2026
  • XAMAuxData.jl Public

    Read auxiliary data fields in SAM, GFA and PAF formats

    BioJulia/XAMAuxData.jl’s past year of commit activity
    Julia 3 MIT 0 0 1 Updated Feb 20, 2026
  • BGZFLib.jl Public

    Read and write BGZF files

    BioJulia/BGZFLib.jl’s past year of commit activity
    Julia 4 MIT 0 0 0 Updated Feb 20, 2026
  • BufferIO.jl Public

    The buffer is the interface

    BioJulia/BufferIO.jl’s past year of commit activity
    Julia 20 MIT 0 6 1 Updated Feb 20, 2026
  • PairwiseMappingFormat.jl Public

    Parser for the PAF format in bioinformatics

    BioJulia/PairwiseMappingFormat.jl’s past year of commit activity
    Julia 3 MIT 0 0 0 Updated Feb 20, 2026

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